I do protein-substrate docking, and routinely used a program called Arguslab through wine. With FC9, I am no longer able to install the .i386 libs for the Nvidia driver, so I can't use Arguslab any longer. This is not much of an issue, since the best docking program is gromacs. This software is designed for linux, though I have not found anyone who maintains .rpm files for FC9.
I wanted to know if anyone had compiled a Gromacs rpm. Gromacs maintains .rpm binaries for CentOS, but these have a dependency conflict with folder usage. I have not compiled software before, and I cannot locate a spec file for Gromacs and FC9 anyhow. Furthermore, there is a KDE GUI for Gromacs that I will also use, though I have had the same issue with finding an FC9 compatible .rpm for it.
Any help in finding an .rpm or a spec file and compiling Gromacs and the GUI would be greatly appreciated. For reference, Gromacs
and Gromacs GUI
Any help that you can offer is appreciated.